Raptor 3.0.1
A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences
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hibf Directory Reference

Files

 
bin_size_in_bits.cpp
 Implements raptor::hibf::bin_size_in_bits.
 
chopper_build.cpp
 Implements raptor::hibf::chopper_build.
 
compute_kmers.cpp
 Implements raptor::hibf::compute_kmers.
 
construct_ibf.cpp
 Implements raptor::hibf::construct_ibf.
 
create_ibfs_from_chopper_pack.cpp
 Implements raptor::hibf::create_ibfs_from_chopper_pack.
 
hierarchical_build.cpp
 Implements raptor::hibf::hierarchical_build.
 
insert_into_ibf.cpp
 Implements raptor::hibf::insert_into_ibf.
 
loop_over_children.cpp
 Implements raptor::hibf::loop_over_children.
 
parse_chopper_pack_header.cpp
 Implements raptor::hibf::parse_chopper_pack_header.
 
parse_chopper_pack_line.cpp
 Implements raptor::hibf::parse_chopper_pack_line.
 
read_chopper_pack_file.cpp
 Implements raptor::hibf::read_chopper_pack_file.
 
update_parent_kmers.cpp
 Implements raptor::hibf::update_parent_kmers.
 
update_user_bins.cpp
 Implements raptor::hibf::update_user_bins.